高通量测序分析钙化性肌腱炎患者microRNA表达谱的差异
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(深圳市第二人民医院 深圳大学第一附属医院,广东 深圳 518035)

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赵喆,男,副主任医师,主要从事足踝及手腕部疾患诊治工作,研究方向为肌腱腱病的发病机制。

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R 686.1

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广东省医学科研基金项目资助课题(A2018262);深圳市卫生健康委学科建设能力提升项目资助 课题(SZXJ2018065);深圳市医疗卫生三名工程项目资助课题(SZSM201612086);深圳市医学重 点学科建设经费资助课题(SZXK025)


Analysis of Differential MicroRNA Expression in Patient with Calcifying Tendinitis through High-throughput Sequencing Technologies
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(Shenzhen Second People's Hospital, The First Affi liated Hospital of Shenzhen University, Guangdong Shenzhen 518035)

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    摘要:

    〔摘 要〕 目的:探讨 microRNA 在钙化性肌腱炎(CT)患者中的表达差异。方法:选取 2019 年 10 月至 2020 年 5 月在 深圳市第二人民医院骨科确诊为 CT 并接受手术治疗的患者 4 例,每例患者均取其炎症肌腱组织(CT 组)及炎旁正常组织 (Ctr 组),提取总 RNA 并进行转录组测序,采用 Illumina HiSeq 2500 高通量测序技术进行深度测序,筛选在两组组织中 差异表达的 microRNA,并进行功能分析。结果:与正常肌腱组织比较,在 P < 0.05、log2 差异倍数(FC)绝对值≥ 2 条 件下,CT 组共有 760 个 microRNA 表达有显著差异。其中 104 个 microRNA 的 |log2(FC)| > 2,其中 24 个显著上调,80 个 显著下调。上调表达最明显的是 miR–3529–5p,为 5.9136 倍。在下调表达最明显的是 miR–486–5p,为 10.0018 倍。该类 microRNA 调控的 COL1A1、GOLGA2、S100A16、SOX9、FOXO1 等靶基因与离子结合和转运、钙通道活性、蛋白激酶 活性和代谢功能密切相关。结论:CT 组织与正常肌腱组织 microRNA 表达谱存在明显差异,差异表达的 microRNA 可能在 CT 的形成中具有重要作用,为继续研究这些 microRNA 在 CT 中的作用机制打下基础。

    Abstract:

    〔Abstract〕Objective: To investigate the expression difference of microRNA in patients with calcifi ed tendonitis. Methods From October 2019 to May 2020, four patients who were diagnosed with CT and received surgical treatment in the Department of orthopedics of Shenzhen Second People's Hospital were selected. Inflammatory tendon tissue (CT group) and para-inflammatory normal tissue (CTR group) were collected from each patient. Total RNA was extracted and sequenced by transcriptome sequencing. The microRNA differentially expressed in the two groups was screened by Illumina HiSeq 2500 high-throughput sequencing technology. Results Compared with normal tendon tissue, there were 760 microRNA signifi cantly changed in calcifi ed tendon tissue. There were 104 differentially expressed genes with log2FC more than 4 times,among which 24 were up-regulated and 80 were down-regulated. The most obvious up-regulated expression was miR-3529 -- 5p, which was 5.9136 times and the most obvious down-regulated expression was miR-486-5p, which was 10.0018 times. The target genes such as COL1A1、GOLGA2、S100A16、 SOX9 and FoxO1 regulated by microRNA are closely related to ion binding and transport,calcium channel activity,protein kinase activity and metabolic function. Conclusion There are signifi cant differences in microRNA expression profi les between calcifi ed tendonitis and normal tendon tissues. The differentially expressed microRNA may play an important role in the formation of calcifi ed tendinitis,which will lay a foundation for further study on the mechanism of microRNA in calcifying tendinitis.

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  • 收稿日期:2021-01-12
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  • 在线发布日期: 2021-11-25
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